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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   night blindness
  

Disease ID 1382
Disease night blindness
Definition
Failure or imperfection of vision at night or in dim light, with good vision only on bright days. (Dorland, 27th ed)
Synonym
blindness night
blindness, night
difficulty seeing at night
loss night vision
night blindness (disorder)
night blindness [disease/finding]
night blindness nos
night blindness nos (disorder)
night blindness, nos
night blindness, unspecified
night vision loss
night-blindness
nyctalopia
poor night vision
unspecified night blindness
unspecified night blindness (disorder)
vision loss night
DOID
ICD10
UMLS
C0028077
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:18)
C0028738  |  nystagmus  |  2
C0035304  |  retinal degeneration  |  2
C0162429  |  malnourished  |  1
C0456909  |  vision loss  |  1
C0035309  |  retinopathy  |  1
C0002418  |  amblyopia  |  1
C0043349  |  xerophthalmia  |  1
C0035333  |  retinitis  |  1
C0035334  |  retinitis pigmentosa  |  1
C0036454  |  visual field loss  |  1
C0730290  |  cone dystrophy  |  1
C0029128  |  optic disc drusen  |  1
C0036992  |  short bowel syndrome  |  1
C0001175  |  acquired immunodeficiency syndrome  |  1
C0029001  |  onchocerciasis  |  1
C0311338  |  fundus albipunctatus  |  1
C0870082  |  hyperkeratosis  |  1
C0035334  |  pigmentary retinopathy  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:14)
6295  |  SAG  |  UniProtKB-KW
6011  |  GRK1  |  UniProtKB-KW
4901  |  NRL  |  CTD_human
5158  |  PDE6B  |  UniProtKB-KW
9187  |  SLC24A1  |  UniProtKB-KW
6010  |  RHO  |  UniProtKB-KW
60506  |  NYX  |  UniProtKB-KW
778  |  CACNA1F  |  UniProtKB-KW
2916  |  GRM6  |  UniProtKB-KW
4308  |  TRPM1  |  UniProtKB-KW
2779  |  GNAT1  |  UniProtKB-KW
345193  |  LRIT3  |  UniProtKB-KW
440435  |  GPR179  |  UniProtKB-KW
2784  |  GNB3  |  UniProtKB-KW
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:110)
24  |  ABCA4  |  3.287  |  DISEASES
60509  |  AGBL5  |  2.865  |  DISEASES
23746  |  AIPL1  |  2.898  |  DISEASES
369  |  ARAF  |  1.402  |  DISEASES
340075  |  ARSI  |  2.09  |  DISEASES
6314  |  ATXN7  |  1.67  |  DISEASES
656  |  BMP8B  |  1.719  |  DISEASES
388939  |  C2orf71  |  2.299  |  DISEASES
57010  |  CABP4  |  5.722  |  DISEASES
778  |  CACNA1F  |  7.245  |  DISEASES
779  |  CACNA1S  |  1.292  |  DISEASES
55799  |  CACNA2D3  |  2.326  |  DISEASES
93589  |  CACNA2D4  |  4.153  |  DISEASES
27101  |  CACYBP  |  1.815  |  DISEASES
801  |  CALM1  |  1.188  |  DISEASES
285331  |  CCDC66  |  3.036  |  DISEASES
92211  |  CDHR1  |  2.211  |  DISEASES
80184  |  CEP290  |  1.089  |  DISEASES
375298  |  CERKL  |  2.148  |  DISEASES
1121  |  CHM  |  3.204  |  DISEASES
1139  |  CHRNA7  |  2.068  |  DISEASES
1184  |  CLCN5  |  1.749  |  DISEASES
1201  |  CLN3  |  1.221  |  DISEASES
7401  |  CLRN1  |  1.992  |  DISEASES
1259  |  CNGA1  |  3.783  |  DISEASES
1382  |  CRABP2  |  1.168  |  DISEASES
23418  |  CRB1  |  3.416  |  DISEASES
9946  |  CRYZL1  |  2.961  |  DISEASES
10106  |  CTDSP2  |  2.079  |  DISEASES
285440  |  CYP4V2  |  4.033  |  DISEASES
1756  |  DMD  |  1.121  |  DISEASES
1805  |  DPT  |  1.319  |  DISEASES
346007  |  EYS  |  3.555  |  DISEASES
84140  |  FAM161A  |  2.231  |  DISEASES
9846  |  GAB2  |  1.067  |  DISEASES
2773  |  GNAI3  |  2.15  |  DISEASES
57512  |  GPR158  |  3.069  |  DISEASES
440435  |  GPR179  |  5.967  |  DISEASES
2857  |  GPR34  |  2.78  |  DISEASES
2897  |  GRIK1  |  1.348  |  DISEASES
6011  |  GRK1  |  5.22  |  DISEASES
2869  |  GRK5  |  1.766  |  DISEASES
2913  |  GRM3  |  1.179  |  DISEASES
3109  |  HLA-DMB  |  1.142  |  DISEASES
3347  |  HTN3  |  1.056  |  DISEASES
9742  |  IFT140  |  2.112  |  DISEASES
3614  |  IMPDH1  |  1.482  |  DISEASES
9735  |  KNTC1  |  1.321  |  DISEASES
167691  |  LCA5  |  3.009  |  DISEASES
3996  |  LLGL1  |  1.073  |  DISEASES
9227  |  LRAT  |  2.007  |  DISEASES
345193  |  LRIT3  |  5.503  |  DISEASES
83552  |  MFRP  |  2.341  |  DISEASES
8972  |  MGAM  |  1.02  |  DISEASES
54893  |  MTMR10  |  2.953  |  DISEASES
4604  |  MYBPC1  |  2.405  |  DISEASES
4647  |  MYO7A  |  2.451  |  DISEASES
4857  |  NOVA1  |  1.932  |  DISEASES
4901  |  NRL  |  3.365  |  DISEASES
4905  |  NSF  |  1.438  |  DISEASES
60506  |  NYX  |  7.398  |  DISEASES
4952  |  OCRL  |  1.012  |  DISEASES
8481  |  OFD1  |  1.554  |  DISEASES
118427  |  OLFM3  |  2.824  |  DISEASES
94233  |  OPN4  |  1.156  |  DISEASES
5015  |  OTX2  |  1.032  |  DISEASES
11240  |  PADI2  |  1.277  |  DISEASES
5158  |  PDE6B  |  4.344  |  DISEASES
5146  |  PDE6C  |  1.845  |  DISEASES
5148  |  PDE6G  |  2.491  |  DISEASES
5322  |  PLA2G5  |  2.298  |  DISEASES
282809  |  POC1B  |  2.925  |  DISEASES
5504  |  PPP1R2  |  2.847  |  DISEASES
56978  |  PRDM8  |  2.926  |  DISEASES
4007  |  PRICKLE3  |  3.509  |  DISEASES
26121  |  PRPF31  |  3.378  |  DISEASES
5950  |  RBP4  |  1.805  |  DISEASES
25898  |  RCHY1  |  1.501  |  DISEASES
8786  |  RGS11  |  4.5  |  DISEASES
6000  |  RGS7  |  3.913  |  DISEASES
388531  |  RGS9BP  |  2.918  |  DISEASES
22999  |  RIMS1  |  2.014  |  DISEASES
6015  |  RING1  |  1.389  |  DISEASES
6103  |  RPGR  |  4.22  |  DISEASES
57096  |  RPGRIP1  |  2.307  |  DISEASES
6247  |  RS1  |  2.373  |  DISEASES
6295  |  SAG  |  5.309  |  DISEASES
221935  |  SDK1  |  2.486  |  DISEASES
54549  |  SDK2  |  3.29  |  DISEASES
6512  |  SLC1A7  |  1.912  |  DISEASES
10166  |  SLC25A15  |  1.478  |  DISEASES
29957  |  SLC25A24  |  3.117  |  DISEASES
9498  |  SLC4A8  |  1.258  |  DISEASES
6658  |  SOX3  |  1.366  |  DISEASES
8406  |  SRPX  |  2.533  |  DISEASES
6491  |  STIL  |  2.58  |  DISEASES
64220  |  STRA6  |  1.645  |  DISEASES
8802  |  SUCLG1  |  1.766  |  DISEASES
8801  |  SUCLG2  |  1.131  |  DISEASES
51684  |  SUFU  |  2.008  |  DISEASES
8867  |  SYNJ1  |  1.891  |  DISEASES
4943  |  TBC1D25  |  2.249  |  DISEASES
10716  |  TBR1  |  1.785  |  DISEASES
4308  |  TRPM1  |  6.686  |  DISEASES
80036  |  TRPM3  |  1.532  |  DISEASES
254173  |  TTLL10  |  1.421  |  DISEASES
7317  |  UBA1  |  1.54  |  DISEASES
10810  |  WASF3  |  1.32  |  DISEASES
7694  |  ZNF135  |  1.588  |  DISEASES
347344  |  ZNF81  |  2.625  |  DISEASES
Locus(Waiting for update.)
Disease ID 1382
Disease night blindness
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:21)
HP:0000572  |  Visual loss  |  3
HP:0000529  |  Slowly progressive visual loss  |  3
HP:0000510  |  Retinitis pigmentosa  |  3
HP:0000639  |  Nystagmus  |  3
HP:0000546  |  Retinal degeneration  |  2
HP:0000580  |  Pigmentary retinopathy  |  1
HP:0000505  |  Poor vision  |  1
HP:0000646  |  Wandering eyes  |  1
HP:0007994  |  Loss of peripheral vision  |  1
HP:0012804  |  Corneal ulceration  |  1
HP:0000962  |  Hyperkeratosis  |  1
HP:0001097  |  Keratoconjunctivitis sicca  |  1
HP:0007502  |  Hyperkeratosis follicularis  |  1
HP:0011003  |  High myopia  |  1
HP:0002721  |  Immunodeficiency  |  1
HP:0012426  |  Optic disc drusen  |  1
HP:0001133  |  Depressed visual field  |  1
HP:0030642  |  Fundus albipunctatus  |  1
HP:0000488  |  Noninflammatory retina disease  |  1
HP:0001061  |  Acne  |  1
HP:0030502  |  Retinoschisis  |  1
Disease ID 1382
Disease night blindness
Manually Symptom(Waiting for update.)
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:3)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs104893790125905876010RHOumls:C0028077BeFreeIn an examination of the effect of three rhodopsin night blindness mutations on the rate of association of 11-cis-retinal with opsin, one of the mutations (G90D) was found to slow the rate of reaction by more than 80-fold.0.0069914752003RHO3129529002GA
rs10489379078460716010RHOumls:C0028077BeFreeIn vitro evidence had suggested that transducin is activated by the Gly90Asp mutation in the absence of both the retinal chromophore and light, termed constitutive activity. The apparent preservation of functioning rods despite extensive and lifelong night-blindness in this kindred is inconsistent with one current hypothesis that chronic rod activation from constitutively active mutant rhodopsin necessarily contributes significantly to photoreceptor demise in human retinal dystrophies.0.0069914751995RHO3129529002GA
rs104893796125905886010RHOumls:C0028077BeFreeThe T94I mutant pigment (with a bound 11-cis-retinal chromophore), like the other known rhodopsin night blindness mutants, is not active in the dark and has wild-type activity upon exposure to light.0.0069914752003RHO3129529014CT
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 1382
Disease night blindness
Case(Waiting for update.)